Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1750

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
49,292	+		GFF1748	0.71	-0.2
49,350	-		GFF1748	0.79	-0.1
49,357	+		GFF1748	0.80	-0.6
49,358	-		GFF1748	0.80	+0.6
49,428	-				-0.9
49,428	-				-0.1
49,429	+				+0.1
49,442	+				-0.8
49,487	-				-0.1
49,502	+				-0.2
50,018	-				-0.0
50,019	+				+0.1
50,041	-				-0.2
50,194	+				+0.6
50,219	-				-0.7
50,263	+				-0.3
50,394	+				+1.6
50,397	+				-1.8
50,397	+				-0.0
50,448	+		GFF1750	0.14	-1.0
50,449	-		GFF1750	0.14	-3.5
50,612	+		GFF1750	0.26	-0.4
50,624	+		GFF1750	0.27	-1.0
50,629	-		GFF1750	0.27	-1.0
50,826	-		GFF1750	0.41	-1.6
51,137	+		GFF1750	0.64	-2.3
51,137	+		GFF1750	0.64	-2.0
51,385	-		GFF1750	0.82	+0.6