Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1686

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
68,588	+		GFF1684	0.72	+0.0
68,712	-				-0.5
68,804	+				-0.3
68,993	-				+0.2
69,033	-				-0.3
69,091	+		GFF1685	0.25	-0.9
69,219	-		GFF1685	0.64	-0.2
69,322	-				+0.2
69,393	+				-0.2
69,491	+				-0.4
69,493	+				+0.0
69,559	+				+0.6
69,666	-				+0.4
69,668	+				-0.5
69,668	+				+0.1
69,749	-		GFF1686	0.14	-1.1
70,154	+		GFF1686	0.42	-0.4
70,235	+		GFF1686	0.48	+0.5
70,236	-		GFF1686	0.48	-0.3
70,331	-		GFF1686	0.55	-0.1
70,365	-		GFF1686	0.57	+0.9
70,402	-		GFF1686	0.59	+0.5
70,519	+		GFF1686	0.68	-0.3
70,523	+		GFF1686	0.68	-0.1
70,578	-		GFF1686	0.72	-0.3
70,580	-		GFF1686	0.72	+0.4
70,793	-		GFF1686	0.87	-0.1
70,820	+		GFF1686	0.89	-0.9
71,011	-				+0.5
71,061	+				-0.9
71,191	-				-0.2
71,767	-				-0.2