Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1645

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
29,249	-		GFF1643	0.34	+0.2
29,378	+		GFF1643	0.55	+0.2
29,420	-		GFF1643	0.62	-0.3
29,423	+		GFF1643	0.62	-0.1
29,526	+		GFF1643	0.80	+0.9
29,549	-		GFF1643	0.83	+0.3
30,455	-		GFF1645	0.33	-0.4
30,455	-		GFF1645	0.33	+0.1
30,657	-		GFF1645	0.61	-0.4
30,689	-		GFF1645	0.65	-3.4
30,689	-		GFF1645	0.65	-0.3
30,933	-				-0.8
30,933	-				-0.6
30,936	-				-0.3
31,089	-		GFF1646	0.25	+0.2
31,520	-				-0.1