Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1412

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
58,862	-				-0.1
58,862	-				-0.9
58,862	-				+0.3
58,862	-				-0.1
58,864	-				-2.4
58,911	-				-4.8
58,951	-		GFF1411	0.13	-3.6
59,080	+		GFF1411	0.48	-2.4
59,092	+		GFF1411	0.51	-2.2
59,097	-		GFF1411	0.53	-2.0
59,097	-		GFF1411	0.53	-2.6
59,127	-		GFF1411	0.61	-3.3
59,209	+		GFF1411	0.83	-1.3
59,209	+		GFF1411	0.83	-4.0
59,986	-				+1.7
60,109	+				-0.5
60,228	+				-0.6
60,359	+		GFF1413	0.15	-0.1
60,364	-		GFF1413	0.15	+0.1
60,509	+		GFF1413	0.26	+0.1
60,513	+		GFF1413	0.26	-0.1
60,514	-		GFF1413	0.26	+0.2
60,514	-		GFF1413	0.26	+0.4
60,770	+		GFF1413	0.46	-0.3
60,771	-		GFF1413	0.46	-1.2
60,792	-		GFF1413	0.47	+0.4
60,796	-		GFF1413	0.48	-1.2
60,828	+		GFF1413	0.50	+0.1
60,832	+		GFF1413	0.50	+0.2
60,834	-		GFF1413	0.50	-0.8
60,971	+		GFF1413	0.61	+0.1