Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF54

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
34,996	+				-0.5
34,997	-				-0.0
35,168	+				-0.0
36,036	-				+0.4
36,149	+				-0.6
36,149	+				-0.2
36,150	-				-1.3
36,150	-				-0.7
36,153	+				-0.1
36,153	+				-0.1
36,153	+				-0.2
36,157	+				+0.0
36,157	+				+0.4
36,189	+				+0.0
36,190	-				-0.2
36,214	-				-1.5
36,260	-				-2.1
36,279	+				-0.3
36,694	-		GFF55	0.16	-0.7
36,694	-		GFF55	0.16	-2.3
36,698	+		GFF55	0.16	-0.9
36,699	-		GFF55	0.16	-1.8
36,817	-		GFF55	0.20	-1.1
36,912	+		GFF55	0.24	-2.3
36,930	+		GFF55	0.25	-2.4
36,963	+		GFF55	0.26	-0.1
36,963	+		GFF55	0.26	-0.6
36,963	+		GFF55	0.26	-0.7