Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4724

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
31,305	-		GFF4723	0.15	-0.2
31,497	+		GFF4723	0.32	-0.2
31,691	+		GFF4723	0.49	-0.1
31,833	-		GFF4723	0.62	+0.4
31,833	-		GFF4723	0.62	-1.2
31,897	+		GFF4723	0.68	-0.3
32,083	+		GFF4723	0.84	-0.0
32,084	-		GFF4723	0.84	+0.0
32,084	-		GFF4723	0.84	-0.4
32,266	+				+0.9
32,267	-				-0.6
32,267	-				-0.4
32,324	+				-0.6
32,433	+		GFF4724	0.18	+0.1
32,433	+		GFF4724	0.18	-0.2
32,434	-		GFF4724	0.18	+0.2
32,597	+		GFF4724	0.34	-0.1
32,683	+		GFF4724	0.42	-1.5
32,688	-		GFF4724	0.43	-0.6
32,777	+		GFF4724	0.52	+0.1
32,864	-		GFF4724	0.60	+0.2
32,892	-		GFF4724	0.63	-0.3
33,207	+				-0.4
33,250	+				+0.4
33,257	+				+0.4
33,259	+				+0.2
33,265	-				+0.6
33,283	+				+1.0
33,283	+				+0.4
33,297	+				-0.5
33,412	+				+0.1
33,424	+				-0.4
33,425	-				+0.2
33,493	+				-0.8
33,493	+				-0.6
33,542	-				+0.3
33,542	-				+0.2
33,546	+				-0.2
33,597	+				+1.0
33,598	-				+0.0
33,666	-				-0.5
33,666	-				+0.7
33,701	+				-0.4
33,843	-		GFF4725	0.17	+0.3
33,946	+		GFF4725	0.22	+0.8
33,946	+		GFF4725	0.22	+0.1
33,947	-		GFF4725	0.22	+0.3
34,013	+		GFF4725	0.25	-0.6
34,105	-		GFF4725	0.29	+0.2