Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4697

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
7,699	+		GFF4695	0.87	+0.4
7,876	-				+0.9
7,915	+				-1.0
8,102	+				-1.0
8,174	+		GFF4696	0.15	-0.2
8,289	+		GFF4696	0.36	-2.2
8,290	-		GFF4696	0.36	+0.4
8,299	+		GFF4696	0.37	+0.5
8,383	-		GFF4696	0.52	+0.0
8,386	-		GFF4696	0.53	-1.4
8,400	+		GFF4696	0.55	-0.3
8,435	+		GFF4696	0.62	+0.7
8,435	+		GFF4696	0.62	-0.3
8,524	-		GFF4696	0.77	-0.1
8,534	-		GFF4696	0.79	+0.5
8,534	-		GFF4696	0.79	-0.9
8,711	-				+1.8
8,732	+				+0.3
8,732	+				-1.2
8,734	+				+0.8
8,734	+				-0.3
8,735	-				-0.8
8,735	-				-0.0
8,781	+		GFF4697	0.14	+0.3
8,951	+		GFF4697	0.31	+0.1
8,954	-		GFF4697	0.31	+0.4
8,970	-		GFF4697	0.33	+1.1
8,998	+		GFF4697	0.36	+0.3
9,142	-		GFF4697	0.51	+0.1
9,233	-		GFF4697	0.60	-0.5
9,233	-		GFF4697	0.60	-0.9
9,579	+				-0.0
9,580	-				+0.0
9,608	-				-0.5
9,618	-				-0.3
9,709	-		GFF4698	0.21	-0.1
9,709	-		GFF4698	0.21	-0.1
9,880	-		GFF4698	0.69	+0.5
9,929	+		GFF4698	0.82	-0.1
10,104	-		GFF4699	0.13	+0.1
10,264	-		GFF4699	0.33	-0.9
10,428	-		GFF4699	0.54	+1.1
10,540	+		GFF4699	0.69	-0.0