Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4585

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
372,553	+		GFF4584	0.26	-2.0
372,611	-		GFF4584	0.31	-0.6
372,844	-		GFF4584	0.50	+0.5
373,042	+		GFF4584	0.66	-0.6
373,043	-		GFF4584	0.66	-1.7
373,135	+		GFF4584	0.74	-1.0
373,135	+		GFF4584	0.74	-0.4
373,150	-		GFF4584	0.75	-0.1
373,158	-		GFF4584	0.76	-1.4
373,229	-		GFF4584	0.81	+0.2
373,427	-				-0.5
373,457	-				-0.7
373,466	+				-0.8
373,704	-		GFF4585	0.21	-0.5
373,892	-		GFF4585	0.37	-1.3
373,892	-		GFF4585	0.37	-2.3
373,948	+		GFF4585	0.42	-1.4
374,319	-		GFF4585	0.74	-0.4
374,337	-		GFF4585	0.76	-1.8
374,339	+		GFF4585	0.76	-1.5
374,340	-		GFF4585	0.76	-0.9
374,340	-		GFF4585	0.76	-1.9
374,340	-		GFF4585	0.76	+0.4
374,406	-		GFF4585	0.82	-0.7
374,612	-				-1.0
374,980	+		GFF4586	0.38	+0.5
374,981	-		GFF4586	0.38	+2.3
375,266	-		GFF4586	0.74	+0.2
375,403	+				-0.8
375,404	-				-0.4
375,404	-				+1.9
375,407	-				-0.0
375,524	+				-0.2