Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4364

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
145,500	+		GFF4363	0.18	-2.6
145,746	+		GFF4363	0.41	+0.6
145,751	+		GFF4363	0.42	+0.2
145,752	-		GFF4363	0.42	+0.2
145,767	+		GFF4363	0.43	+0.1
145,768	-		GFF4363	0.43	+0.4
145,931	+		GFF4363	0.59	+0.6
145,931	+		GFF4363	0.59	-0.5
145,931	+		GFF4363	0.59	-1.6
145,932	-		GFF4363	0.59	-1.3
146,180	+		GFF4363	0.82	+0.4
146,250	-		GFF4363	0.89	-0.0
146,399	-				+0.1
146,500	+				+0.3
146,531	-		GFF4364	0.11	+0.0
146,531	-		GFF4364	0.11	-0.2
146,787	-		GFF4364	0.67	-0.5
146,787	-		GFF4364	0.67	-0.1
146,840	+		GFF4364	0.78	+0.2
146,909	-				+0.7
146,909	-				-1.6
146,909	-				+0.5
146,909	-				+0.1
146,986	+				-0.5
147,030	+				-0.4
147,054	-				-1.4
147,220	+		GFF4365	0.14	-0.1
147,241	+		GFF4365	0.15	+0.2
147,447	-		GFF4365	0.26	-0.3
147,457	+		GFF4365	0.27	+0.2
147,463	+		GFF4365	0.27	-1.3
147,665	+		GFF4365	0.39	-0.0
147,819	-		GFF4365	0.47	-0.5
147,826	-		GFF4365	0.48	-0.3