Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3762

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
30,623	-				+0.1
30,693	-		GFF3761	0.13	-0.3
30,693	-		GFF3761	0.13	+0.1
30,743	-		GFF3761	0.21	-0.6
30,743	-		GFF3761	0.21	+1.3
30,743	-		GFF3761	0.21	-0.4
30,798	-		GFF3761	0.31	+0.6
30,845	-		GFF3761	0.39	-0.2
31,086	-		GFF3761	0.81	+0.1
31,226	-				+0.4
31,261	+				-0.7
31,553	-				+0.7
31,571	+				+0.2
31,794	-		GFF3762	0.25	+0.4
31,942	+		GFF3762	0.45	+0.6
32,149	+		GFF3762	0.73	+0.8
32,298	-				-0.8
32,358	-				+0.3
32,521	+		GFF3763	0.16	-0.6
32,521	+		GFF3763	0.16	+0.2
32,522	-		GFF3763	0.16	-0.4
32,522	-		GFF3763	0.16	-0.4
32,530	-		GFF3763	0.17	+0.2
32,764	+		GFF3763	0.40	+1.4
32,785	+		GFF3763	0.42	-0.1
32,887	-		GFF3763	0.52	+0.1
32,898	+		GFF3763	0.53	-1.8
32,898	+		GFF3763	0.53	-0.2
33,031	+		GFF3763	0.67	-0.3
33,214	-		GFF3763	0.85	-0.5
33,268	-				-0.5
33,275	-				+0.8
33,275	-				+0.0
33,277	+				-0.0