Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3703

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
7,596	-		GFF3701	0.14	-0.1
7,644	-		GFF3701	0.20	-0.1
7,645	+		GFF3701	0.20	-1.1
7,646	-		GFF3701	0.20	+0.2
7,749	-		GFF3701	0.33	+0.7
7,927	+		GFF3701	0.55	+0.1
7,985	+		GFF3701	0.62	-0.1
8,127	+		GFF3701	0.79	-0.2
8,185	+		GFF3701	0.86	-0.4
8,186	-		GFF3701	0.87	+0.1
8,186	-		GFF3701	0.87	+0.7
8,273	+				+1.0
8,366	+				-0.7
8,366	+				-1.0
8,374	+				+0.5
8,374	+				+0.4
8,375	-				+0.1
8,375	-				-0.3
8,501	+		GFF3702	0.62	-0.0
8,590	+				-1.0
8,638	+		GFF3703	0.24	-0.3
8,786	+		GFF3703	0.69	-1.2
8,787	-		GFF3703	0.69	-0.4
8,923	+				-0.1
9,208	+		GFF3704	0.13	-0.9
9,209	-		GFF3704	0.13	+1.7
9,218	+		GFF3704	0.13	-0.3
9,233	-		GFF3704	0.14	+0.1
9,314	-		GFF3704	0.17	+0.0
9,668	+		GFF3704	0.31	+0.0
9,733	+		GFF3704	0.34	+0.2
9,734	-		GFF3704	0.34	+0.3
9,777	-		GFF3704	0.36	-1.7
9,855	-		GFF3704	0.39	-0.3