Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3330

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
101,638	+		GFF3329	0.65	-0.3
101,752	-		GFF3329	0.69	-1.7
101,754	+		GFF3329	0.69	-1.2
101,769	+		GFF3329	0.70	-0.5
101,769	+		GFF3329	0.70	-0.1
102,310	-				+1.0
102,482	-				+0.1
102,482	-				-0.2
102,539	-				+1.1
102,620	-				+0.2
102,620	-				-0.0
102,637	-				+0.5
102,839	+				-0.2
102,844	-				-0.8
102,938	-		GFF3331	0.26	-0.6
103,094	+		GFF3331	0.67	-0.0
103,095	-		GFF3331	0.67	+0.0
103,095	-		GFF3331	0.67	-1.7
103,095	-		GFF3331	0.67	+0.6
103,099	-		GFF3331	0.69	-0.7
103,206	+				+0.3
103,207	-				-0.2
103,207	-				+0.5
103,207	-				-0.5
103,244	-				+0.2
103,244	-				+0.4
103,258	+				-0.4
103,468	-		GFF3332	0.14	-0.2
103,476	-		GFF3332	0.15	-0.4
103,754	-		GFF3332	0.38	-0.2
103,785	+		GFF3332	0.40	-0.0
103,786	-		GFF3332	0.40	-0.1