Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2800

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
322,399	+				+0.3
322,400	-				+0.0
322,405	+				-0.4
322,511	-				-0.6
322,547	-				+0.5
322,586	+				+0.4
322,755	+		GFF2799	0.30	-0.6
322,883	-		GFF2799	0.47	+0.2
322,915	+		GFF2799	0.51	-0.1
322,952	+		GFF2799	0.56	+0.1
323,024	+		GFF2799	0.66	+0.2
323,025	-		GFF2799	0.66	-0.8
323,282	-				+0.0
323,461	-		GFF2800	0.29	+0.1
323,461	-		GFF2800	0.29	-0.6
323,861	+				+0.2
323,862	-				+0.1
323,865	-				+0.1
323,865	-				+0.2
323,904	-				-0.0
323,922	+				-1.0
323,923	-				+0.4
323,960	+				-0.3
323,961	-				+1.4
323,961	-				+0.1
323,961	-				+1.3
324,014	+				+0.1
324,017	+				-0.0
324,034	-				-0.2
324,047	-				+0.5
324,047	-				-0.1
324,064	-				-0.3
324,448	-		GFF2801	0.42	-0.2
324,483	+		GFF2801	0.45	-0.5
324,483	+		GFF2801	0.45	-2.1
324,484	-		GFF2801	0.46	-0.6
324,699	+		GFF2801	0.69	+0.4
324,700	-		GFF2801	0.69	-1.4