Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF25

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,363	+		GFF23	0.75	-0.3
3,364	-		GFF23	0.75	-1.6
3,592	-				+0.3
3,631	-				-0.4
3,651	-				+0.2
3,681	+				-0.4
3,740	+				-0.8
3,839	-				-0.9
3,957	+				+0.4
3,957	+				+0.0
3,958	-				-0.1
4,209	+		GFF25	0.21	-0.4
4,405	+		GFF25	0.48	+0.2
4,490	+		GFF25	0.59	-0.1
4,604	+		GFF25	0.74	+1.7
4,643	+		GFF25	0.80	+0.3
4,686	-		GFF25	0.85	+0.6