Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2174

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
20,691	+				+0.7
20,774	+				-0.5
20,955	+		GFF2173	0.21	-2.6
20,955	+		GFF2173	0.21	-1.0
20,955	+		GFF2173	0.21	+0.3
20,955	+		GFF2173	0.21	-2.3
20,956	-		GFF2173	0.22	-0.3
20,957	+		GFF2173	0.22	-2.5
20,957	+		GFF2173	0.22	+1.0
20,961	+		GFF2173	0.22	-0.1
21,183	+		GFF2173	0.53	-0.0
21,251	-		GFF2173	0.62	-1.1
21,760	+		GFF2174	0.58	+0.4
21,761	-		GFF2174	0.58	+0.3
21,889	-				-0.2
21,964	-				+0.3
21,984	-				+0.4
22,104	+		GFF2175	0.11	-0.5
22,209	+		GFF2175	0.18	+2.9
22,275	-		GFF2175	0.22	-0.0
22,546	+		GFF2175	0.41	+0.1
22,561	-		GFF2175	0.42	-0.0
22,561	-		GFF2175	0.42	-0.7