Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2163

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
8,441	+				-1.3
8,739	+				-0.2
8,739	+				-0.6
8,740	-				+0.2
8,740	-				+0.1
8,813	+				+0.4
9,267	-				+0.3
9,288	+				+1.7
9,444	-				-0.9
9,485	+		GFF2163	0.31	+0.2
9,486	-		GFF2163	0.31	+0.5
9,586	-		GFF2163	0.83	-0.6
9,648	-				+0.8
9,650	-				-0.2
9,671	-				+0.4
9,671	-				-0.1
9,674	+				+0.1
9,674	+				+0.1
9,675	-				+0.7
9,684	+				-1.7
9,722	+				+0.4
9,726	+				+0.5
9,882	+				-0.1
9,984	-				+0.6
10,238	-				+0.5
10,319	-				+0.6
10,344	-				+0.3
10,503	+				-0.3
10,586	-				-0.4
10,608	+				-0.1