Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2067

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
29,370	-		GFF2066	0.16	-0.6
29,525	-		GFF2066	0.33	-0.7
29,525	-		GFF2066	0.33	-0.3
29,623	+		GFF2066	0.44	-0.7
29,624	-		GFF2066	0.44	-0.1
29,848	+		GFF2066	0.69	+1.0
30,100	-				-0.5
30,132	+				+0.4
30,132	+				+0.4
30,137	+				-0.4
30,169	+				-0.0
30,245	-				-1.8
30,358	+		GFF2067	0.39	+0.6
30,369	-		GFF2067	0.44	-0.0
30,415	+		GFF2067	0.69	+0.4
30,551	-				-0.4
30,561	+				-0.1
30,566	+				-0.6
30,685	+				+0.1
30,686	-				-0.2
30,728	+				-0.2
30,729	-				+0.5
30,773	-		GFF2068	0.13	-0.1
30,869	+		GFF2068	0.21	-0.0
30,911	+		GFF2068	0.24	+0.4
31,021	-		GFF2068	0.33	+0.3
31,370	+		GFF2068	0.60	+0.4