Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1951

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
141,135	-		GFF1950	0.19	+2.3
141,685	+		GFF1950	0.69	-1.8
141,686	-		GFF1950	0.70	-0.1
141,686	-		GFF1950	0.70	-0.1
141,851	+		GFF1950	0.85	-0.6
141,942	-				+0.6
142,063	-				+1.3
142,185	-		GFF1951	0.14	-1.0
142,234	-		GFF1951	0.20	-0.5
142,356	+		GFF1951	0.33	+0.3
142,367	-		GFF1951	0.34	-0.2
142,384	-		GFF1951	0.36	-0.3
142,441	+		GFF1951	0.42	-0.0
142,462	+		GFF1951	0.44	-0.4
142,530	+		GFF1951	0.51	-0.2
142,531	-		GFF1951	0.51	-0.2
142,824	+		GFF1951	0.83	+0.1
142,942	+				+0.3
143,045	+				+1.5
143,045	+				-0.6
143,289	+		GFF1952	0.25	+0.7
143,351	-		GFF1952	0.36	-0.4
143,369	+		GFF1952	0.40	-0.1
143,369	+		GFF1952	0.40	+0.2
143,558	-		GFF1952	0.74	-1.4
143,694	+				-0.2
143,879	-		GFF1953	0.20	-1.0