Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1668

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
52,336	+		GFF1666	0.70	-0.0
52,403	+		GFF1666	0.74	-1.0
52,428	-		GFF1666	0.75	-0.7
52,776	+				-0.4
52,839	-				-0.2
53,030	-				+0.3
53,274	-		GFF1668	0.39	-0.7
53,402	-		GFF1668	0.65	-0.7
53,429	-		GFF1668	0.70	-0.1
53,513	-		GFF1668	0.87	-0.7
53,581	+				-0.4
53,581	+				-0.2
53,582	-				+0.1
53,620	-				+0.3
53,724	-				-0.2
54,123	+		GFF1669	0.26	+1.5
54,325	-		GFF1669	0.36	+0.8
54,325	-		GFF1669	0.36	+0.7
54,573	-		GFF1669	0.48	+0.2