Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1357

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
7,355	+				-1.3
7,355	+				+1.3
7,485	+		GFF1356	0.18	+0.3
7,605	+		GFF1356	0.32	-1.1
8,214	-				-0.0
8,310	+		GFF1357	0.17	+0.1
8,541	+				-0.3
8,541	+				-0.8
8,554	+				-0.1
8,561	+				+0.4
8,677	+				+0.7
8,719	-				+0.1
8,780	-				-0.7
8,922	+		GFF1358	0.12	+0.2
8,926	-		GFF1358	0.12	+0.7
9,160	+		GFF1358	0.19	+0.1
9,161	-		GFF1358	0.19	-0.4
9,163	-		GFF1358	0.19	+0.1
9,201	+		GFF1358	0.20	-0.3
9,236	-		GFF1358	0.21	+0.2
9,317	-		GFF1358	0.23	+0.4
9,417	+		GFF1358	0.26	-0.6