Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF968
Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-2 |
|---|---|---|---|---|---|
| remove | |||||
| 154,424 | + | GFF966 | 0.72 | -0.2 | |
| 154,741 | + | GFF967 | 0.25 | -0.0 | |
| 154,770 | + | GFF967 | 0.30 | -0.3 | |
| 155,015 | - | GFF967 | 0.70 | -2.1 | |
| 155,033 | - | GFF967 | 0.73 | -0.1 | |
| 155,059 | + | GFF967 | 0.77 | +0.2 | |
| 155,060 | - | GFF967 | 0.77 | +0.2 | |
| 155,104 | + | GFF967 | 0.85 | +0.2 | |
| 155,197 | + | +0.0 | |||
| 155,201 | + | -0.0 | |||
| 155,219 | - | +0.5 | |||
| 155,251 | - | +0.0 | |||
| 155,458 | + | GFF968 | 0.51 | -1.5 | |
| 155,463 | - | GFF968 | 0.55 | -0.3 | |
| 155,544 | + | +0.2 | |||
| 155,604 | + | +1.0 | |||
| 155,604 | + | -0.3 | |||
| 155,699 | + | -0.1 | |||
| 155,754 | + | +0.0 | |||
| 155,754 | + | -0.0 | |||
| 155,783 | + | -0.3 | |||
| 155,838 | + | -0.3 | |||
| 155,853 | - | +0.2 | |||
| 156,484 | - | GFF969 | 0.65 | +0.1 |
Or see this region's nucleotide sequence