Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF892 and GFF893 are separated by 0 nucleotides GFF893 and GFF894 overlap by 4 nucleotides
GFF892 - lysosomal glucosyl ceramidase-like protein, at 72,365 to 73,708
GFF892
GFF893 - Inosose isomerase (EC 5.3.99.-), at 73,709 to 74,542
GFF893
GFF894 - FIG01046005: hypothetical protein, at 74,539 to 75,705
GFF894
Position (kb) 73
74
75 Strain fitness (log2 ratio) -1
0
1 at 72.811 kb on + strand, within GFF892 at 72.820 kb on + strand, within GFF892 at 72.893 kb on + strand, within GFF892 at 72.894 kb on - strand, within GFF892 at 72.986 kb on + strand, within GFF892 at 72.986 kb on + strand, within GFF892 at 72.987 kb on - strand, within GFF892 at 72.988 kb on + strand, within GFF892 at 72.989 kb on - strand, within GFF892 at 73.070 kb on + strand, within GFF892 at 73.172 kb on + strand, within GFF892 at 73.197 kb on + strand, within GFF892 at 73.297 kb on + strand, within GFF892 at 73.466 kb on + strand, within GFF892 at 73.467 kb on - strand, within GFF892 at 73.467 kb on - strand, within GFF892 at 73.491 kb on - strand, within GFF892 at 73.592 kb on + strand at 73.592 kb on + strand at 73.592 kb on + strand at 73.592 kb on + strand at 73.640 kb on - strand at 73.678 kb on + strand at 73.679 kb on - strand at 73.687 kb on - strand at 73.799 kb on + strand, within GFF893 at 73.819 kb on + strand, within GFF893 at 73.820 kb on - strand, within GFF893 at 73.820 kb on - strand, within GFF893 at 73.846 kb on + strand, within GFF893 at 73.852 kb on - strand, within GFF893 at 73.888 kb on + strand, within GFF893 at 73.889 kb on - strand, within GFF893 at 73.902 kb on - strand, within GFF893 at 74.194 kb on - strand, within GFF893 at 74.418 kb on + strand, within GFF893 at 74.433 kb on - strand, within GFF893 at 74.532 kb on + strand at 74.541 kb on - strand at 74.541 kb on - strand at 74.618 kb on + strand at 74.647 kb on + strand at 74.833 kb on + strand, within GFF894 at 74.860 kb on + strand, within GFF894 at 75.114 kb on + strand, within GFF894 at 75.132 kb on - strand, within GFF894 at 75.270 kb on + strand, within GFF894 at 75.271 kb on - strand, within GFF894 at 75.450 kb on - strand, within GFF894 at 75.465 kb on + strand, within GFF894
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 72,811 + GFF892 0.33 -0.3 72,820 + GFF892 0.34 +0.3 72,893 + GFF892 0.39 +0.5 72,894 - GFF892 0.39 +0.2 72,986 + GFF892 0.46 +0.2 72,986 + GFF892 0.46 +0.7 72,987 - GFF892 0.46 -0.4 72,988 + GFF892 0.46 +0.4 72,989 - GFF892 0.46 +0.2 73,070 + GFF892 0.52 +0.2 73,172 + GFF892 0.60 +0.2 73,197 + GFF892 0.62 +0.1 73,297 + GFF892 0.69 -0.1 73,466 + GFF892 0.82 -0.4 73,467 - GFF892 0.82 +0.6 73,467 - GFF892 0.82 +0.4 73,491 - GFF892 0.84 +0.1 73,592 + +0.2 73,592 + -0.5 73,592 + -0.1 73,592 + +0.5 73,640 - -0.5 73,678 + -0.1 73,679 - +0.6 73,687 - -1.3 73,799 + GFF893 0.11 -0.0 73,819 + GFF893 0.13 +0.8 73,820 - GFF893 0.13 -0.5 73,820 - GFF893 0.13 -0.4 73,846 + GFF893 0.16 -0.0 73,852 - GFF893 0.17 +0.3 73,888 + GFF893 0.21 +0.3 73,889 - GFF893 0.22 +1.0 73,902 - GFF893 0.23 +0.7 74,194 - GFF893 0.58 +0.7 74,418 + GFF893 0.85 -0.2 74,433 - GFF893 0.87 +0.5 74,532 + +0.2 74,541 - +0.1 74,541 - +0.3 74,618 + -1.4 74,647 + +0.2 74,833 + GFF894 0.25 -0.8 74,860 + GFF894 0.28 +0.6 75,114 + GFF894 0.49 -0.2 75,132 - GFF894 0.51 -0.9 75,270 + GFF894 0.63 -0.4 75,271 - GFF894 0.63 +0.1 75,450 - GFF894 0.78 +0.6 75,465 + GFF894 0.79 +0.3
Or see this region's nucleotide sequence