Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF646

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
725	+		GFF645	0.46	+0.7
1,123	+				+0.2
1,123	+				-0.0
1,199	-				+1.3
1,366	-				-0.4
1,366	-				-0.2
1,447	+				-0.6
1,506	+				-0.6
1,581	+				+0.1
1,701	+		GFF646	0.13	+0.5
1,888	+		GFF646	0.32	+0.4
1,969	+		GFF646	0.40	-0.2
1,969	+		GFF646	0.40	+0.4
2,057	-		GFF646	0.49	+0.8
2,164	+		GFF646	0.60	+0.1
2,288	-		GFF646	0.72	-0.1
2,338	+		GFF646	0.77	+1.5
2,339	-		GFF646	0.77	+1.0
2,370	+		GFF646	0.81	+0.6
2,464	+				+0.2
2,535	+				+0.4
2,535	+				+0.4
2,536	-				+0.6
2,686	-		GFF647	0.16	+0.1
2,696	+		GFF647	0.18	-0.2
2,829	-		GFF647	0.35	+0.4
2,840	+		GFF647	0.36	+0.4
2,861	+		GFF647	0.39	+0.1
2,909	+		GFF647	0.45	+0.1
2,936	+		GFF647	0.48	+0.1
2,957	-		GFF647	0.51	+0.1
2,991	-		GFF647	0.55	-0.1
3,083	+		GFF647	0.67	+0.1
3,083	+		GFF647	0.67	+1.1
3,120	+		GFF647	0.72	-0.5
3,150	+		GFF647	0.76	+1.0
3,154	-		GFF647	0.76	+0.2
3,189	-		GFF647	0.81	+0.1
3,342	-				-0.9
3,342	-				-0.2
3,404	-				-0.9
3,404	-				+0.4
3,404	-				+0.8
3,497	+				+0.4
3,498	-				-0.1
3,498	-				-0.1
3,533	+		GFF648	0.14	-0.1
3,533	+		GFF648	0.14	-0.0