Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4891

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
6,887	+		GFF4890	0.55	-2.7
6,887	+		GFF4890	0.55	-2.1
6,888	-		GFF4890	0.55	-3.8
6,888	-		GFF4890	0.55	+0.1
7,204	+		GFF4890	0.73	+0.5
7,358	+		GFF4890	0.82	-2.1
7,359	-		GFF4890	0.82	-0.4
7,377	+		GFF4890	0.83	-1.6
7,492	+		GFF4890	0.90	-0.7
7,493	-		GFF4890	0.90	-0.9
7,495	-		GFF4890	0.90	-1.1
7,495	-		GFF4890	0.90	-1.6
7,617	-				+0.6
7,627	+				-2.4
7,651	-				-0.9
7,672	-				+0.4
7,672	-				-1.6
8,012	+		GFF4891	0.19	+0.5
8,108	+		GFF4891	0.25	-0.8
8,136	-		GFF4891	0.26	-1.2
8,233	-		GFF4891	0.32	-0.4
8,249	+		GFF4891	0.33	-2.0
8,252	+		GFF4891	0.33	+0.9
8,369	-		GFF4891	0.40	-2.0
8,372	-		GFF4891	0.40	+0.4
8,372	-		GFF4891	0.40	+0.5
8,372	-		GFF4891	0.40	-0.6
8,372	-		GFF4891	0.40	-0.8
8,470	+		GFF4891	0.45	-3.1
8,497	+		GFF4891	0.47	-0.8
8,506	-		GFF4891	0.47	-1.4
8,657	-		GFF4891	0.56	+0.4
8,899	+		GFF4891	0.70	-1.1
9,027	+		GFF4891	0.77	+0.4
9,027	+		GFF4891	0.77	+0.4
9,030	+		GFF4891	0.77	-1.2
9,030	+		GFF4891	0.77	-0.3
9,040	+		GFF4891	0.78	-1.6
9,041	-		GFF4891	0.78	-1.9
9,283	+				-1.8
9,283	+				-2.3
9,283	+				-1.1
9,284	-				-0.1
9,326	+				-1.9
9,327	-				-2.7
9,431	-				+0.1
9,483	+				-1.8
9,581	+				-1.0
9,607	-				-0.2
9,646	-				-0.0
9,646	-				+0.4
9,829	-		GFF4892	0.29	-0.8
9,996	+		GFF4892	0.46	-0.8
10,072	+		GFF4892	0.54	-0.3
10,163	+		GFF4892	0.63	-0.1
10,417	-		GFF4892	0.89	-0.2