Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4848

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
146,277	-				+0.2
146,300	+				-0.1
146,389	+		GFF4847	0.29	+0.5
146,390	-		GFF4847	0.30	-0.2
146,447	+		GFF4847	0.47	-0.4
146,447	+		GFF4847	0.47	+0.2
146,447	+		GFF4847	0.47	+0.2
146,448	-		GFF4847	0.47	-0.3
146,448	-		GFF4847	0.47	+0.2
146,448	-		GFF4847	0.47	+0.2
146,585	+		GFF4847	0.89	-0.4
146,585	+		GFF4847	0.89	-0.6
146,586	-		GFF4847	0.89	-0.1
146,586	-		GFF4847	0.89	-0.1
146,586	-		GFF4847	0.89	-0.1
146,953	-				-0.3
147,032	-				-0.8
147,057	-				+0.3
147,289	+		GFF4848	0.10	-0.9
147,480	-		GFF4848	0.45	+0.5
147,484	+		GFF4848	0.46	-0.4
147,560	+		GFF4848	0.60	-0.8
147,561	-		GFF4848	0.60	+0.0
147,561	-		GFF4848	0.60	+0.4
147,566	-		GFF4848	0.61	-0.2
147,630	+		GFF4848	0.73	-0.4
147,672	-		GFF4848	0.80	-0.2
147,672	-		GFF4848	0.80	+0.0
147,807	-				-0.5
147,819	+				-0.3
147,824	+				-0.5
148,024	+		GFF4849	0.21	+0.2
148,101	+		GFF4849	0.30	+0.5
148,325	-		GFF4849	0.56	+0.5
148,376	+		GFF4849	0.62	-0.6
148,522	-		GFF4849	0.80	+1.1
148,544	+		GFF4849	0.82	+0.0
148,610	-		GFF4849	0.90	-0.2
148,731	+				-0.3
148,731	+				+0.3
148,732	-				-0.4
148,761	-				+0.2
148,765	+				+0.2