Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4766
Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
73,534 | + | GFF4765 | 0.63 | -0.5 | |
73,600 | - | GFF4765 | 0.71 | -0.1 | |
73,715 | + | GFF4765 | 0.87 | -0.8 | |
73,716 | - | GFF4765 | 0.87 | -1.8 | |
74,301 | - | +0.4 | |||
74,569 | + | GFF4766 | 0.64 | +0.7 | |
74,612 | - | +0.4 | |||
74,983 | - | +0.7 | |||
75,076 | + | +0.2 | |||
75,116 | + | -0.2 | |||
75,253 | - | -0.3 | |||
75,303 | + | +0.4 | |||
75,329 | + | -0.1 | |||
75,365 | + | +0.4 | |||
75,373 | + | +0.2 | |||
75,452 | + | -0.5 | |||
75,452 | + | -0.3 | |||
75,477 | - | +0.6 |
Or see this region's nucleotide sequence