Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4696

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
7,162	+		GFF4695	0.38	+0.7
7,163	-		GFF4695	0.38	+0.4
7,163	-		GFF4695	0.38	-0.7
7,292	-		GFF4695	0.50	+0.2
7,339	+		GFF4695	0.54	-0.5
7,339	+		GFF4695	0.54	+0.1
7,340	-		GFF4695	0.54	+0.2
7,340	-		GFF4695	0.54	+0.1
7,340	-		GFF4695	0.54	-0.5
7,399	-		GFF4695	0.60	-0.2
7,401	-		GFF4695	0.60	+0.2
7,401	-		GFF4695	0.60	+0.7
7,566	+		GFF4695	0.75	-0.5
7,567	-		GFF4695	0.75	-0.2
7,567	-		GFF4695	0.75	-0.1
7,579	+		GFF4695	0.76	+0.6
7,627	+		GFF4695	0.81	+1.3
7,627	+		GFF4695	0.81	-0.6
7,640	-		GFF4695	0.82	-0.1
7,699	+		GFF4695	0.87	+1.1
7,876	-				-0.4
7,915	+				-0.2
8,102	+				-0.5
8,174	+		GFF4696	0.15	+0.2
8,289	+		GFF4696	0.36	-0.1
8,290	-		GFF4696	0.36	+0.3
8,299	+		GFF4696	0.37	+0.6
8,383	-		GFF4696	0.52	+0.1
8,386	-		GFF4696	0.53	+0.7
8,400	+		GFF4696	0.55	-0.2
8,435	+		GFF4696	0.62	+0.6
8,435	+		GFF4696	0.62	+0.1
8,524	-		GFF4696	0.77	+0.2
8,534	-		GFF4696	0.79	+0.4
8,534	-		GFF4696	0.79	+0.2
8,711	-				+1.0
8,732	+				+0.3
8,732	+				+0.1
8,734	+				+1.8
8,734	+				+0.2
8,735	-				+0.8
8,735	-				+0.3
8,781	+		GFF4697	0.14	-0.4
8,951	+		GFF4697	0.31	-0.5
8,954	-		GFF4697	0.31	+0.0
8,970	-		GFF4697	0.33	+0.6
8,998	+		GFF4697	0.36	-0.3
9,142	-		GFF4697	0.51	-0.1
9,233	-		GFF4697	0.60	-0.1
9,233	-		GFF4697	0.60	-0.2
9,579	+				-0.3
9,580	-				-0.1
9,608	-				-0.1
9,618	-				-0.2