Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4323
Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
103,442 | + | GFF4322 | 0.48 | +0.2 | |
103,482 | + | GFF4322 | 0.55 | +0.1 | |
103,563 | + | GFF4322 | 0.71 | -0.3 | |
103,729 | + | +0.6 | |||
103,760 | + | -0.0 | |||
103,761 | - | -1.5 | |||
103,761 | - | -0.0 | |||
103,911 | - | GFF4323 | 0.10 | +0.2 | |
104,053 | + | GFF4323 | 0.25 | +0.1 | |
104,129 | + | GFF4323 | 0.33 | +0.1 | |
104,328 | + | GFF4323 | 0.53 | +0.1 | |
104,726 | - | -0.0 | |||
104,778 | + | +0.8 | |||
104,779 | - | +0.3 | |||
104,822 | + | -1.4 |
Or see this region's nucleotide sequence