Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3867

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
142,390	-				+0.7
142,448	+		GFF3866	0.15	+0.4
142,449	-		GFF3866	0.15	-1.0
142,454	+		GFF3866	0.16	-0.4
142,535	-		GFF3866	0.24	+0.1
142,535	-		GFF3866	0.24	+0.6
142,584	-		GFF3866	0.28	+0.1
142,664	+		GFF3866	0.36	+0.4
142,665	-		GFF3866	0.36	+0.7
142,763	-		GFF3866	0.45	+0.1
142,763	-		GFF3866	0.45	-0.1
142,766	-		GFF3866	0.45	-0.1
142,943	+		GFF3866	0.62	+0.3
142,944	-		GFF3866	0.62	-0.3
142,944	-		GFF3866	0.62	+1.8
143,165	-		GFF3866	0.83	+0.8
143,217	-		GFF3866	0.88	+1.3
143,572	+		GFF3867	0.50	-0.7
143,572	+		GFF3867	0.50	-0.1
143,649	-		GFF3867	0.67	-0.4
143,735	+		GFF3867	0.86	-0.6
143,908	+				+0.1
143,933	+				+0.1
144,355	+		GFF3868	0.26	+0.2
144,422	+		GFF3868	0.29	-0.4
144,423	-		GFF3868	0.29	-1.4
144,658	+		GFF3868	0.40	-1.3