Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF363

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
81,807	+				-0.5
81,856	+				-0.7
81,902	-				-0.9
81,920	+				+0.1
81,920	+				+0.1
81,921	-				-0.4
81,921	-				-0.3
81,980	-				+0.2
81,980	-				-0.6
81,990	+		GFF362	0.11	-1.1
82,003	+		GFF362	0.14	+0.1
82,004	-		GFF362	0.14	-0.3
82,009	-		GFF362	0.15	-1.0
82,014	+		GFF362	0.15	+0.1
82,041	-		GFF362	0.20	+0.7
82,058	+		GFF362	0.22	+1.2
82,059	-		GFF362	0.23	+1.0
82,059	-		GFF362	0.23	+1.4
82,059	-		GFF362	0.23	-0.1
82,059	-		GFF362	0.23	+0.3
82,059	-		GFF362	0.23	-0.5
82,093	+		GFF362	0.28	-0.3
82,093	+		GFF362	0.28	-0.6
82,094	-		GFF362	0.28	-0.2
82,094	-		GFF362	0.28	-0.5
82,094	-		GFF362	0.28	+0.6
82,094	-		GFF362	0.28	-0.3
82,094	-		GFF362	0.28	-1.0
82,134	+		GFF362	0.35	-0.2
82,165	-		GFF362	0.40	+0.0
82,217	-		GFF362	0.48	+0.3
82,217	-		GFF362	0.48	+0.1
82,217	-		GFF362	0.48	-0.0
82,283	-		GFF362	0.59	-0.3
82,338	+		GFF362	0.68	+0.5
82,339	-		GFF362	0.68	+0.4
82,346	+		GFF362	0.69	+0.4
82,434	+		GFF362	0.83	+0.2
82,438	-		GFF362	0.84	+0.4
82,438	-		GFF362	0.84	-0.6
82,438	-		GFF362	0.84	-1.6
82,513	+				-0.2
82,513	+				-0.1
82,780	+				+0.3
82,781	-				-0.3
82,842	+				+1.4
82,843	-				+0.5
82,843	-				-1.6
82,843	-				+0.3
82,879	+		GFF363	0.10	+0.0
82,991	-		GFF363	0.23	+0.5
83,023	+		GFF363	0.27	-0.5
83,023	+		GFF363	0.27	+0.2
83,024	-		GFF363	0.27	+0.2
83,053	+		GFF363	0.30	+0.5
83,061	+		GFF363	0.31	+0.0
83,132	+		GFF363	0.39	-0.4
83,132	+		GFF363	0.39	+0.8
83,362	-		GFF363	0.65	+1.8
83,443	+		GFF363	0.74	+0.4
83,477	-		GFF363	0.78	+0.3
83,477	-		GFF363	0.78	-0.1
83,502	+		GFF363	0.81	+0.1
83,503	-		GFF363	0.81	+0.2
83,534	+		GFF363	0.85	-0.1
83,536	+		GFF363	0.85	+0.3
83,536	+		GFF363	0.85	-0.2
83,536	+		GFF363	0.85	-0.2
83,542	+		GFF363	0.86	+0.4
83,542	+		GFF363	0.86	-0.3
83,554	+		GFF363	0.87	+0.0
83,601	-				-0.0
83,642	+				-0.0
83,642	+				+0.4
83,642	+				+0.6
83,642	+				-0.1
83,643	-				-0.2
83,643	-				-0.0
83,669	-				+0.2
83,699	+				+0.9
83,699	+				-0.6
83,714	+				+0.3
83,779	+				-0.5
83,784	+				-0.2
83,784	+				+0.4
83,784	+				-0.3
83,784	+				+0.7
83,784	+				+0.7
83,785	-				+0.2
83,785	-				-0.1
84,034	+		GFF364	0.31	+1.1
84,034	+		GFF364	0.31	+0.0
84,063	-		GFF364	0.34	-0.1
84,216	+		GFF364	0.52	+0.2
84,217	-		GFF364	0.52	+0.7
84,311	-		GFF364	0.62	-1.1
84,318	+		GFF364	0.63	+0.1
84,331	-		GFF364	0.65	-0.3
84,423	+		GFF364	0.75	+0.3
84,472	+		GFF364	0.81	-0.1
84,611	+				-0.5
84,633	+				+0.0
84,637	-				-0.2
84,660	+				+0.3
84,661	-				+0.4
84,661	-				+0.3