Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3628

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
377,105	+				+0.4
377,210	+				+0.3
377,211	-				-0.8
377,268	-		GFF3627	0.16	-0.2
377,422	-		GFF3627	0.33	-1.5
377,444	+		GFF3627	0.35	-0.2
377,487	+		GFF3627	0.40	+0.0
377,487	+		GFF3627	0.40	-1.8
377,713	+		GFF3627	0.65	-0.2
377,713	+		GFF3627	0.65	-0.5
377,723	-		GFF3627	0.66	+0.7
377,849	+		GFF3627	0.80	-0.3
377,865	+		GFF3627	0.82	-0.3
378,449	+		GFF3628	0.66	-0.0
378,459	+		GFF3628	0.68	+0.1
378,460	-		GFF3628	0.68	+0.0
378,756	+				+0.5
378,766	-				-0.0
378,830	+		GFF3629	0.11	-0.4
378,831	-		GFF3629	0.11	+0.3
378,831	-		GFF3629	0.11	+0.2
378,930	+		GFF3629	0.16	+0.3
378,931	-		GFF3629	0.16	-0.1
378,931	-		GFF3629	0.16	+0.6
378,931	-		GFF3629	0.16	+0.5
378,988	+		GFF3629	0.19	-0.1
378,989	-		GFF3629	0.19	+0.5
378,989	-		GFF3629	0.19	+0.2
379,232	+		GFF3629	0.31	-0.3
379,259	+		GFF3629	0.32	+0.1
379,394	+		GFF3629	0.39	+0.7
379,394	+		GFF3629	0.39	+0.5
379,608	-		GFF3629	0.49	-0.7