Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3409

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
172,463	-		GFF3407	0.56	+0.7
173,244	+				+0.3
173,374	-		GFF3409	0.16	+0.6
173,746	+		GFF3409	0.59	-0.9
173,942	-		GFF3409	0.82	-0.3
174,036	+				-0.8
174,037	-				-0.3
174,037	-				+0.2
174,132	+				-0.7
174,298	-		GFF3410	0.19	-0.1
174,322	+		GFF3410	0.21	-1.1
174,386	-		GFF3410	0.27	-0.1
174,386	-		GFF3410	0.27	+0.6
174,386	-		GFF3410	0.27	+0.2
174,387	+		GFF3410	0.27	-0.2
174,388	-		GFF3410	0.27	-0.6
174,710	-		GFF3410	0.55	-0.1
174,878	-		GFF3410	0.70	+1.0
174,943	-		GFF3410	0.76	-0.1
174,947	-		GFF3410	0.76	+0.8