Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF32

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
8,078	+		GFF30	0.41	+0.3
8,250	-		GFF30	0.73	+0.8
8,373	+				+0.3
8,445	+				-0.1
8,511	+				-0.6
8,512	-				+0.4
8,512	-				+0.5
8,513	+				-0.3
8,513	+				-0.2
8,513	+				+0.6
8,513	+				+0.1
8,513	+				+0.2
8,514	-				+1.0
8,514	-				+0.7
8,526	-				-1.3
8,551	-				-0.0
8,604	+				+0.4
8,617	+		GFF31	0.11	-0.4
8,653	+		GFF31	0.29	+0.1
8,658	+		GFF31	0.31	+0.9
8,696	+		GFF31	0.50	+0.1
8,781	+				-0.2
8,800	+				-1.1
8,825	-				+0.4
8,829	+				+0.0
8,830	-				-0.5
8,859	-				-0.6
8,938	+		GFF32	0.46	-1.2