Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3013

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
27,651	-		GFF3012	0.36	-0.2
27,724	+		GFF3012	0.48	-0.0
27,891	+		GFF3012	0.76	+0.1
27,891	+		GFF3012	0.76	-0.3
27,892	-		GFF3012	0.76	+0.3
27,915	+		GFF3012	0.80	+0.1
27,916	-		GFF3012	0.80	+0.7
27,923	+		GFF3012	0.82	-0.2
27,985	-				+0.1
28,125	+				+0.0
28,125	+				+0.4
28,128	+				-0.1
28,173	+				+0.4
28,173	+				-0.3
28,200	-				+0.3
28,258	-				+0.3
28,268	+				+0.3
28,276	+				+0.6
28,298	-				-0.1
28,301	+				+0.5
28,302	-				-0.0
28,333	+				-0.1
28,333	+				+0.4
28,333	+				+0.1
28,334	-				-0.1
28,498	-				+0.2
28,507	-				-0.1
28,513	+				+0.0
28,557	-		GFF3013	0.12	-0.1
28,706	+		GFF3013	0.24	+0.0
28,706	+		GFF3013	0.24	+0.3
28,707	-		GFF3013	0.24	+0.5
28,707	-		GFF3013	0.24	+0.3
28,707	-		GFF3013	0.24	+0.4
28,829	+		GFF3013	0.34	-0.0
28,915	-		GFF3013	0.41	+0.4
29,460	-		GFF3013	0.85	+0.5
29,537	-				+0.2
29,709	+				-0.2
29,709	+				-0.4
29,709	+				-0.1
29,709	+				-0.4
29,710	-				+0.1
29,897	+				+0.8
30,571	-				-1.1
30,609	-				+0.3
30,643	-				+0.2