Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2897

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
23,321	-		GFF2896	0.67	-0.3
23,382	-		GFF2896	0.71	+0.1
23,508	+		GFF2896	0.79	-0.3
23,509	-		GFF2896	0.79	-0.3
23,620	+		GFF2896	0.87	+0.1
23,627	+		GFF2896	0.87	-0.2
23,760	-				+0.1
23,795	+				+0.4
23,796	-				-0.7
23,799	-				-0.1
23,803	+				+0.5
23,804	-				+0.2
23,822	-				+0.6
23,822	-				-0.1
23,848	-				+0.9
23,869	+				-0.2
23,893	-				+0.1
23,893	-				-0.1
23,947	+				+0.7
24,258	+		GFF2897	0.32	+0.9
24,283	+		GFF2897	0.34	+0.2
24,635	-		GFF2897	0.74	+0.2
24,876	+				-1.0
24,915	-		GFF2898	0.14	+0.5
24,987	-		GFF2898	0.35	+0.5
24,987	-		GFF2898	0.35	+0.3
24,999	-		GFF2898	0.39	-0.0
25,056	+		GFF2898	0.55	-0.4
25,057	-		GFF2898	0.56	-0.3
25,057	-		GFF2898	0.56	-0.2
25,130	+		GFF2898	0.77	+0.6
25,240	+		GFF2899	0.11	-0.0
25,304	-		GFF2899	0.31	+0.1
25,341	+		GFF2899	0.43	+0.7
25,341	+		GFF2899	0.43	+0.5
25,342	-		GFF2899	0.43	-0.1
25,342	-		GFF2899	0.43	-0.1
25,346	-		GFF2899	0.44	+0.6
25,358	-		GFF2899	0.48	+0.7
25,484	+		GFF2899	0.88	-0.4
25,568	-				-0.5
25,635	+				+0.5
25,636	-				-1.9
25,749	+				+0.2