Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2477

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
94,274	+				+0.9
95,803	-		GFF2477	0.30	+0.1
95,813	-		GFF2477	0.31	-1.5
95,817	-		GFF2477	0.31	-1.7
95,836	-		GFF2477	0.32	-0.3
95,836	-		GFF2477	0.32	-0.8
95,909	+		GFF2477	0.36	-1.8
95,910	-		GFF2477	0.36	-0.9
95,910	-		GFF2477	0.36	-0.4
95,910	-		GFF2477	0.36	-2.0
95,914	-		GFF2477	0.36	-0.7
95,943	-		GFF2477	0.38	-3.3
96,170	+		GFF2477	0.51	-1.7
96,171	-		GFF2477	0.51	-1.1
96,171	-		GFF2477	0.51	+1.1
96,988	-				+1.7
97,132	-				-1.1
97,156	-				-1.7
97,158	+				-2.8
97,158	+				-2.0
97,158	+				-1.2
97,159	-				-0.1
97,159	-				-2.6
97,159	-				-1.3
97,159	-				-0.6
97,185	+				-1.7
97,204	+				-1.3
97,204	+				-1.1
97,205	-				-1.9
97,222	+				-0.9
97,231	-				-2.1
97,231	-				-0.9
97,247	+				-1.1
97,247	+				-0.9
97,248	-				-1.2
97,401	-				-1.7
97,526	+				-1.1