Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2219

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
9,181	+				+0.7
9,181	+				+0.0
9,181	+				+0.0
9,184	+				+0.1
9,190	+				+0.5
9,586	-		GFF2218	0.38	+0.0
9,642	+		GFF2218	0.49	+0.6
9,725	+		GFF2218	0.65	+1.0
9,776	+		GFF2218	0.75	+0.1
9,877	-				+0.2
9,878	-				-0.6
9,939	+				+0.4
9,940	-				+0.3
9,956	+				+0.0
9,956	+				-0.1
9,961	+				+0.6
10,140	+				+0.7
10,141	-				-0.7
10,141	-				+0.0
10,142	+				-0.6
10,143	-				-0.3
10,143	-				-1.0
10,147	-				-0.2
10,161	+				+0.1
10,163	+				-0.3
10,163	+				-0.0
10,163	+				-0.2
10,261	-		GFF2219	0.12	-0.6
10,439	+		GFF2219	0.25	-0.3
10,440	-		GFF2219	0.25	-2.2
10,440	-		GFF2219	0.25	+0.1
10,452	-		GFF2219	0.26	+0.2
10,471	+		GFF2219	0.27	+0.2
10,617	-		GFF2219	0.38	-0.4
10,704	-		GFF2219	0.44	-0.4
10,815	-		GFF2219	0.52	+0.6
10,815	-		GFF2219	0.52	-1.2
10,818	+		GFF2219	0.53	-0.5
10,818	+		GFF2219	0.53	-1.4
10,819	-		GFF2219	0.53	-0.6
10,819	-		GFF2219	0.53	+0.1
10,899	-		GFF2219	0.59	-1.1
11,100	+		GFF2219	0.73	-0.1
11,101	-		GFF2219	0.73	-1.0
11,289	+		GFF2219	0.87	-1.8
11,312	-		GFF2219	0.89	-0.7
11,348	+				-0.2
11,657	-				+1.1
11,669	-				+0.5
11,720	+				+0.1
11,754	-				+0.4
11,878	-				+0.5
11,977	-		GFF2220	0.14	-0.2
12,063	+		GFF2220	0.20	-0.3
12,064	-		GFF2220	0.20	+1.9
12,406	+		GFF2220	0.44	-0.9
12,406	+		GFF2220	0.44	+0.1
12,407	-		GFF2220	0.44	+1.4