Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1935

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
126,786	-				+0.3
126,853	+				-0.3
127,047	-		GFF1934	0.24	-0.2
127,086	-		GFF1934	0.29	-0.7
127,099	+		GFF1934	0.30	-3.5
127,247	-		GFF1934	0.49	-2.8
127,273	-		GFF1934	0.52	-0.9
127,298	-		GFF1934	0.55	-2.1
127,305	-		GFF1934	0.56	-0.5
127,357	-		GFF1934	0.62	-2.1
127,514	+		GFF1934	0.81	-1.5
127,515	-		GFF1934	0.82	-1.9
127,598	-				-1.4
127,675	-				-0.3
127,675	-				-1.1
127,799	-		GFF1935	0.13	+0.6
127,868	-		GFF1935	0.20	+1.9
127,953	+		GFF1935	0.29	-1.8
128,032	+		GFF1935	0.36	-0.6
128,084	-		GFF1935	0.41	-2.1
128,206	+		GFF1935	0.53	-0.8
128,306	-		GFF1935	0.63	+0.4
128,397	-		GFF1935	0.72	-0.5
128,697	-				+0.0
128,700	+				-0.8
128,700	+				-1.2
128,900	+		GFF1936	0.14	-2.6
128,933	-		GFF1936	0.17	-0.8
128,987	+		GFF1936	0.21	-0.9
128,987	+		GFF1936	0.21	-1.5
128,988	-		GFF1936	0.21	-2.5
129,015	+		GFF1936	0.24	-1.1
129,061	+		GFF1936	0.28	-1.1
129,108	-		GFF1936	0.32	-0.9
129,162	-		GFF1936	0.37	-0.6
129,334	+		GFF1936	0.52	+0.1
129,350	-		GFF1936	0.53	-0.8
129,525	+		GFF1936	0.69	+1.3
129,528	-		GFF1936	0.69	-0.9
129,589	+		GFF1936	0.74	-0.4
129,605	+		GFF1936	0.76	-1.8
129,611	+		GFF1936	0.76	-0.6
129,611	+		GFF1936	0.76	-0.6
129,611	+		GFF1936	0.76	-0.2
129,612	-		GFF1936	0.76	-1.1