Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1921

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
112,056	+		GFF1919	0.20	+2.4
112,179	-		GFF1919	0.36	+0.8
112,200	-		GFF1919	0.38	-0.3
112,452	+		GFF1919	0.70	+0.3
112,497	+		GFF1919	0.76	+0.1
112,498	-		GFF1919	0.76	-0.1
112,539	+		GFF1919	0.81	+0.0
112,577	+		GFF1919	0.86	+0.4
112,584	+		GFF1919	0.87	-0.2
112,584	+		GFF1919	0.87	-0.3
112,584	+		GFF1919	0.87	-0.4
112,585	-		GFF1919	0.87	+0.0
112,585	-		GFF1919	0.87	+0.2
112,841	-		GFF1920	0.65	+0.1
112,949	+				-0.2
113,119	+		GFF1921	0.26	-1.2
113,244	+		GFF1921	0.48	-0.0
113,245	-		GFF1921	0.48	-1.5
113,482	+		GFF1921	0.89	-0.5
113,496	-				-3.4
113,524	+				-1.8
113,640	-				+0.6
113,661	+				+0.2
113,668	-				+0.3
113,718	-		GFF1922	0.11	+0.0
113,878	-		GFF1922	0.22	+0.1
113,881	+		GFF1922	0.22	-0.5
113,900	+		GFF1922	0.24	-0.3
113,948	+		GFF1922	0.27	+1.1
113,981	+		GFF1922	0.29	-0.3
114,341	-		GFF1922	0.55	-1.5
114,493	+		GFF1922	0.66	+1.0