Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1880

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
71,299	-		GFF1879	0.38	-0.7
71,365	-		GFF1879	0.42	-2.1
71,488	-		GFF1879	0.51	-1.2
71,513	+		GFF1879	0.53	-0.8
71,616	+		GFF1879	0.60	-1.4
71,616	+		GFF1879	0.60	-2.5
71,673	-		GFF1879	0.64	-1.9
71,673	-		GFF1879	0.64	-1.5
71,729	+		GFF1879	0.67	-0.8
71,730	-		GFF1879	0.67	-2.6
71,888	+		GFF1879	0.78	-1.4
71,889	-		GFF1879	0.78	-2.0
71,979	-		GFF1879	0.84	-0.6
72,225	+				-1.4
72,226	-				-0.7
72,300	-				-1.3
72,342	+				-1.4
72,411	-		GFF1880	0.13	-2.0
72,439	+		GFF1880	0.15	-0.9
72,452	-		GFF1880	0.16	-0.1
72,452	-		GFF1880	0.16	-1.1
72,624	+		GFF1880	0.27	-1.1
72,640	-		GFF1880	0.28	-1.4
72,653	+		GFF1880	0.29	-1.1
72,654	-		GFF1880	0.29	-1.0
72,749	+		GFF1880	0.35	-1.2
72,790	-		GFF1880	0.38	-1.2
72,790	-		GFF1880	0.38	+0.5
72,791	+		GFF1880	0.38	-2.9
72,792	-		GFF1880	0.38	+1.0
72,871	-		GFF1880	0.43	-1.2
72,871	-		GFF1880	0.43	-1.9
73,212	-		GFF1880	0.65	-0.1
73,474	+		GFF1880	0.83	-0.5
73,506	+		GFF1880	0.85	-2.2
73,506	+		GFF1880	0.85	-1.9
73,736	-				-0.6
73,745	-				-2.2
73,887	+				-2.2
73,887	+				-1.0
73,888	-				-1.3
73,888	-				-0.7
73,896	-				-0.3
74,011	+				-0.5
74,115	+				-1.3
74,116	-				-1.0
74,116	-				-0.2
74,116	-				-0.2
74,128	-				-1.4
74,252	+		GFF1881	0.11	-2.5
74,253	-		GFF1881	0.11	-2.5
74,263	-		GFF1881	0.11	-0.5
74,289	+		GFF1881	0.13	-1.4
74,290	-		GFF1881	0.13	-1.6