Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1747

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
48,319	-		GFF1747	0.85	-1.6
48,354	+		GFF1747	0.89	+0.0
48,639	+				+0.2
48,740	-				+0.0
48,740	-				-0.2
48,740	-				-0.8
48,745	-				-0.6
48,919	+		GFF1748	0.19	-0.3
48,920	-		GFF1748	0.19	-0.1
48,993	+		GFF1748	0.29	-0.2
48,993	+		GFF1748	0.29	-1.0
48,993	+		GFF1748	0.29	+0.0
48,993	+		GFF1748	0.29	-0.5
48,993	+		GFF1748	0.29	-0.2
48,994	-		GFF1748	0.29	+0.4
49,127	-		GFF1748	0.48	-0.8
49,196	+		GFF1748	0.58	+0.7
49,196	+		GFF1748	0.58	-0.4
49,196	+		GFF1748	0.58	-0.3
49,196	+		GFF1748	0.58	-0.1
49,197	-		GFF1748	0.58	-0.0
49,292	+		GFF1748	0.71	-0.1
49,350	-		GFF1748	0.79	+0.2
49,357	+		GFF1748	0.80	+0.1
49,358	-		GFF1748	0.80	+0.7
49,428	-				+0.2
49,428	-				-0.0
49,429	+				-0.0
49,442	+				-0.4