Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1679

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
63,561	+				+0.5
63,731	-		GFF1678	0.14	+0.7
63,741	-		GFF1678	0.16	+0.5
64,092	+		GFF1678	0.86	+2.3
64,151	-				-0.1
64,151	-				+0.1
64,197	+				+0.1
64,198	-				+2.1
64,830	-		GFF1679	0.76	-0.1
64,927	-				+0.6
64,927	-				+0.3
65,018	-				+0.3
65,126	+				+0.1
65,142	-				-0.0
65,201	+				+0.1
65,349	-		GFF1680	0.33	-0.2
65,387	+		GFF1680	0.45	-0.2
65,387	+		GFF1680	0.45	-0.4
65,387	+		GFF1680	0.45	+0.8
65,473	+		GFF1680	0.70	+0.8
65,600	+				-0.1
65,658	-				+0.1
65,908	+		GFF1681	0.19	+0.1
65,970	+		GFF1681	0.32	+0.8