Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF965

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
149,400	+		GFF964	0.76	+0.0
149,453	+		GFF964	0.77	-0.1
149,628	+		GFF964	0.82	+0.1
149,629	-		GFF964	0.82	-0.1
149,630	+		GFF964	0.82	+0.2
149,631	-		GFF964	0.82	+0.4
149,631	-		GFF964	0.82	-1.7
149,631	-		GFF964	0.82	-0.9
149,744	-		GFF964	0.85	+0.1
149,890	+		GFF964	0.89	-0.4
150,003	-				-0.1
150,003	-				+0.2
150,138	-				-0.4
150,387	+				-0.0
150,521	-				-0.2
150,530	+				-0.3
150,530	+				+0.2
150,530	+				-1.0
150,530	+				+0.5
150,531	-				+0.2
150,531	-				-0.1
150,531	-				-1.1
150,577	+				-1.6
150,622	-				-0.1
150,622	-				-0.3
150,845	-		GFF965	0.14	-0.4
150,903	+		GFF965	0.16	+0.4
150,904	-		GFF965	0.16	-0.0
150,905	+		GFF965	0.16	+0.2
150,906	-		GFF965	0.16	-0.4
150,906	-		GFF965	0.16	-0.7
151,032	+		GFF965	0.19	+0.5
151,191	+		GFF965	0.23	+0.0
151,329	+		GFF965	0.27	+0.1
151,411	-		GFF965	0.29	-0.1
151,557	+		GFF965	0.33	-1.0
151,564	+		GFF965	0.34	+0.0
151,569	-		GFF965	0.34	+0.6
151,569	-		GFF965	0.34	+0.5
151,613	-		GFF965	0.35	-0.7
151,767	-		GFF965	0.39	-0.9
152,057	+		GFF965	0.47	-0.3
152,058	-		GFF965	0.47	-1.7
152,339	+		GFF965	0.55	+0.3
152,383	-		GFF965	0.56	-0.0
152,411	-		GFF965	0.57	+0.3
152,464	+		GFF965	0.58	-0.9
152,470	-		GFF965	0.59	+0.1
152,683	+		GFF965	0.64	+0.4
152,683	+		GFF965	0.64	-0.8
152,869	+		GFF965	0.70	-0.8
153,359	+		GFF965	0.83	-0.1
153,359	+		GFF965	0.83	+0.1
153,362	+		GFF965	0.83	-0.6
153,363	-		GFF965	0.83	-0.3
153,508	+		GFF965	0.87	-0.3
153,525	+		GFF965	0.88	-0.5
153,662	+				+1.4
153,662	+				-0.7
153,821	+				-0.1
153,822	-				+0.2
153,872	+				-0.1
153,873	-				-0.7
153,937	-				+1.0
154,100	-		GFF966	0.18	-0.3
154,100	-		GFF966	0.18	+0.0
154,131	-		GFF966	0.23	-0.1
154,424	+		GFF966	0.72	-0.0
154,741	+		GFF967	0.25	+1.6
154,770	+		GFF967	0.30	+0.1