Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF929

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
105,900	-				+1.1
106,021	+		GFF927	0.35	-1.4
106,025	+		GFF927	0.36	-0.6
106,039	-		GFF927	0.39	+0.6
106,039	-		GFF927	0.39	+0.2
106,042	+		GFF927	0.40	-0.2
106,073	+		GFF927	0.47	+0.1
106,074	-		GFF927	0.47	+0.3
106,083	-		GFF927	0.49	-0.2
106,095	+		GFF927	0.52	+0.0
106,144	-		GFF927	0.63	-0.3
106,153	-		GFF927	0.65	+0.1
106,164	+		GFF927	0.67	+0.5
106,164	+		GFF927	0.67	+1.0
106,501	-		GFF928	0.30	-0.8
106,501	-		GFF928	0.30	-1.8
106,545	-		GFF928	0.41	-1.0
106,545	-		GFF928	0.41	-0.3
106,545	-		GFF928	0.41	-0.6
106,595	-		GFF928	0.54	-0.2
106,700	-		GFF928	0.81	-0.7
106,718	+		GFF928	0.86	-1.4
106,719	-		GFF928	0.86	-0.6
106,722	+		GFF928	0.87	-0.7
106,723	-		GFF928	0.87	-0.5
106,723	-		GFF928	0.87	+0.1
106,786	+				-0.5
106,797	+				+0.4
106,997	+		GFF929	0.32	+0.2
106,997	+		GFF929	0.32	+0.3
106,998	-		GFF929	0.32	-0.3
107,000	+		GFF929	0.33	-0.3
107,004	-		GFF929	0.34	-0.4
107,004	-		GFF929	0.34	+0.2
107,081	-		GFF929	0.50	-1.4
107,137	-		GFF929	0.63	-0.5
107,137	-		GFF929	0.63	-0.1
107,235	+		GFF929	0.84	+0.6
107,346	+				-0.3
107,347	-				-0.1
107,347	-				-0.8
107,350	-				-0.2
107,378	+				+0.3
107,402	-				-0.6
107,565	+		GFF930	0.26	+0.3
107,577	-		GFF930	0.27	-1.0
107,577	-		GFF930	0.27	+0.3
107,577	-		GFF930	0.27	-1.5
107,578	+		GFF930	0.27	-0.4
107,578	+		GFF930	0.27	-2.8
107,579	-		GFF930	0.27	-1.9
107,579	-		GFF930	0.27	+2.9
107,761	+		GFF930	0.47	+0.1
107,762	-		GFF930	0.47	+0.4
107,786	+		GFF930	0.50	-1.9
107,963	-		GFF930	0.68	-0.4
107,969	+		GFF930	0.69	-0.3
107,969	+		GFF930	0.69	-2.4
107,969	+		GFF930	0.69	-0.8
108,194	+				-1.7
108,230	+				-0.4
108,261	+				-0.6