Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF902
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 82,705 | - | +0.1 | |||
| 83,798 | - | GFF902 | 0.23 | -0.3 | |
| 83,906 | - | GFF902 | 0.36 | -0.9 | |
| 83,909 | - | GFF902 | 0.36 | -1.0 | |
| 84,171 | - | GFF902 | 0.66 | -0.0 | |
| 84,238 | + | GFF902 | 0.73 | -0.0 | |
| 85,172 | + | -0.3 | |||
| 85,172 | + | -0.4 | |||
| 85,173 | - | +0.2 | |||
| 85,342 | - | GFF904 | 0.11 | -0.1 | |
| 85,381 | + | GFF904 | 0.14 | +0.1 | |
| 85,381 | + | GFF904 | 0.14 | +0.7 | |
| 85,389 | - | GFF904 | 0.15 | -0.2 |
Or see this region's nucleotide sequence