Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF841

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
22,168	+		GFF840	0.39	+0.1
22,280	-		GFF840	0.49	+0.1
22,323	+		GFF840	0.52	+0.2
22,328	-		GFF840	0.53	-0.4
22,328	-		GFF840	0.53	-0.8
22,328	-		GFF840	0.53	-0.2
22,402	-		GFF840	0.59	-0.0
22,495	-		GFF840	0.67	+0.7
22,503	+		GFF840	0.68	-0.1
22,759	+		GFF840	0.90	-0.4
22,759	+		GFF840	0.90	+0.8
22,759	+		GFF840	0.90	-0.4
22,760	-		GFF840	0.90	-0.3
22,760	-		GFF840	0.90	+0.3
22,760	-		GFF840	0.90	-0.1
22,760	-		GFF840	0.90	-0.9
22,760	-		GFF840	0.90	-0.4
22,760	-		GFF840	0.90	+0.5
22,760	-		GFF840	0.90	-0.1
22,825	-				-0.1
22,865	-				+0.5
22,866	+				+0.5
22,867	-				+0.2
22,927	+				-1.3
22,928	-				+0.2
22,928	-				-0.1
22,981	-				-1.8
22,990	-				-0.2
23,261	+		GFF841	0.18	-1.6
23,265	+		GFF841	0.19	-0.8
23,266	-		GFF841	0.19	-0.8
23,330	+		GFF841	0.23	+0.9
23,331	-		GFF841	0.23	-0.8
23,331	-		GFF841	0.23	-0.2
23,397	-		GFF841	0.27	-0.1
23,540	+		GFF841	0.36	-0.1
23,758	-		GFF841	0.49	+0.4
23,790	+		GFF841	0.51	+0.1
23,833	-		GFF841	0.54	+0.0
23,837	+		GFF841	0.54	+0.1
23,838	-		GFF841	0.54	-0.5
23,917	+		GFF841	0.59	-0.0
23,984	+		GFF841	0.63	-0.4
23,984	+		GFF841	0.63	+0.3
24,228	+		GFF841	0.78	-0.1
24,229	-		GFF841	0.78	+0.3
24,250	-		GFF841	0.79	-0.2
24,266	+		GFF841	0.80	+0.0
24,267	-		GFF841	0.80	+0.1
24,267	-		GFF841	0.80	-0.1
24,299	-		GFF841	0.82	-0.9
24,305	+		GFF841	0.83	-0.0
24,350	-		GFF841	0.85	+0.2
24,362	+		GFF841	0.86	+0.3
24,371	+		GFF841	0.87	+0.4
24,511	-				-0.4
24,555	-				-0.0
24,598	-				+0.2
24,600	+				+0.1
24,600	+				-0.4
24,637	+				+0.4
24,682	+		GFF842	0.19	+0.3
24,682	+		GFF842	0.19	+0.4
24,683	-		GFF842	0.19	+0.9
24,917	+				-0.2
24,920	+				+0.1
24,957	-				+0.5
25,104	+		GFF843	0.22	-0.7
25,153	+		GFF843	0.39	+0.3
25,154	-		GFF843	0.39	+0.2
25,154	-		GFF843	0.39	+0.9
25,189	+		GFF843	0.50	+0.3
25,304	-		GFF843	0.88	-0.2
25,304	-		GFF843	0.88	+0.1
25,316	-				+0.1
25,339	-				-0.2
25,339	-				-0.1
25,345	-				-0.3
25,371	-				+0.5
25,371	-				+0.2
25,378	+				+0.7
25,415	+				-0.3
25,416	-				-0.0
25,482	+				+0.3
25,512	-				+0.1
25,554	-				+0.8
25,575	-				+0.1