Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF829
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 11,371 | + | GFF828 | 0.31 | -0.8 | |
| 11,372 | - | GFF828 | 0.31 | -0.0 | |
| 11,558 | + | GFF828 | 0.49 | -0.8 | |
| 11,559 | - | GFF828 | 0.49 | +0.7 | |
| 11,652 | + | GFF828 | 0.59 | -1.1 | |
| 11,731 | + | GFF828 | 0.67 | +0.3 | |
| 11,739 | + | GFF828 | 0.67 | -2.6 | |
| 11,869 | - | GFF828 | 0.80 | -0.5 | |
| 12,131 | + | -1.0 | |||
| 12,133 | + | -0.2 | |||
| 12,134 | - | +1.1 | |||
| 12,317 | - | GFF829 | 0.87 | -0.8 | |
| 12,390 | - | +0.6 |
Or see this region's nucleotide sequence