Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF724

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
81,226	+		GFF723	0.42	+0.7
81,227	-		GFF723	0.42	+0.5
81,228	+		GFF723	0.42	-0.2
81,228	+		GFF723	0.42	-0.7
81,440	+		GFF723	0.66	+2.2
81,615	-		GFF723	0.85	-0.0
81,692	+				+0.2
81,693	-				-0.7
81,727	-				+0.3
81,857	-				+0.1
81,892	-				+0.3
81,969	-				-0.1
81,979	-				+1.3
82,006	+				-0.1
82,099	+				-1.0
82,100	-				-0.5
82,100	-				-0.7
82,100	-				-0.1
82,149	-		GFF724	0.16	-0.4
82,283	+		GFF724	0.34	-0.8
82,283	+		GFF724	0.34	-0.1
82,330	-		GFF724	0.41	-1.0
82,346	+		GFF724	0.43	-0.9
82,349	-		GFF724	0.43	-1.1
82,374	+		GFF724	0.46	-0.2
82,374	+		GFF724	0.46	+0.8
82,375	-		GFF724	0.47	-0.7
82,434	-		GFF724	0.54	-0.2
82,467	-		GFF724	0.59	-2.6
82,475	+		GFF724	0.60	-0.2
82,475	+		GFF724	0.60	-0.4
82,515	+		GFF724	0.65	-1.2
82,727	+				-1.3
82,945	+		GFF725	0.14	+0.1
83,137	+		GFF725	0.29	-0.6
83,137	+		GFF725	0.29	+0.5
83,138	-		GFF725	0.29	-0.5
83,138	-		GFF725	0.29	-0.8
83,138	-		GFF725	0.29	-0.2
83,232	+		GFF725	0.37	-0.2
83,232	+		GFF725	0.37	-0.2
83,267	+		GFF725	0.40	+0.0
83,267	+		GFF725	0.40	-0.2
83,268	-		GFF725	0.40	-0.4
83,336	-		GFF725	0.45	-2.6
83,386	+		GFF725	0.49	+0.4
83,387	-		GFF725	0.50	-0.4
83,387	-		GFF725	0.50	-0.6
83,482	+		GFF725	0.57	-0.2
83,540	-		GFF725	0.62	-0.2