Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF684 and GFF685 are separated by 32 nucleotides GFF685 and GFF686 are separated by 7 nucleotides GFF686 and GFF687 are separated by 2 nucleotides GFF687 and GFF688 overlap by 1 nucleotides
GFF684 - Putative membrane protein, at 41,490 to 42,011
GFF684
GFF685 - Putative inner membrane protein, at 42,044 to 42,643
GFF685
GFF686 - Putative inner membrane protein, at 42,651 to 43,211
GFF686
GFF687 - Inner membrane protein YbhQ, at 43,214 to 44,176
GFF687
GFF688 - Cardiolipin synthetase (EC 2.7.8.-), at 44,176 to 45,417
GFF688
Position (kb) 42
43
44 Strain fitness (log2 ratio) -1
0
1 at 41.804 kb on - strand, within GFF684 at 41.830 kb on + strand, within GFF684 at 42.595 kb on - strand at 42.782 kb on + strand, within GFF686 at 42.858 kb on - strand, within GFF686 at 42.881 kb on + strand, within GFF686 at 43.094 kb on + strand, within GFF686 at 43.095 kb on - strand, within GFF686 at 43.153 kb on - strand, within GFF686 at 43.153 kb on - strand, within GFF686 at 43.153 kb on - strand, within GFF686 at 43.363 kb on + strand, within GFF687 at 43.363 kb on + strand, within GFF687 at 43.609 kb on + strand, within GFF687 at 43.610 kb on - strand, within GFF687 at 43.644 kb on + strand, within GFF687 at 43.645 kb on - strand, within GFF687 at 43.645 kb on - strand, within GFF687 at 43.654 kb on + strand, within GFF687 at 43.738 kb on + strand, within GFF687 at 43.763 kb on - strand, within GFF687 at 43.783 kb on + strand, within GFF687 at 43.810 kb on + strand, within GFF687 at 43.813 kb on + strand, within GFF687 at 43.814 kb on - strand, within GFF687 at 43.839 kb on + strand, within GFF687 at 43.900 kb on - strand, within GFF687 at 43.996 kb on + strand, within GFF687 at 44.022 kb on - strand, within GFF687 at 44.171 kb on - strand at 44.171 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-1 remove 41,804 - GFF684 0.60 +0.5 41,830 + GFF684 0.65 +0.7 42,595 - -0.4 42,782 + GFF686 0.23 +0.1 42,858 - GFF686 0.37 +0.2 42,881 + GFF686 0.41 +0.2 43,094 + GFF686 0.79 +0.3 43,095 - GFF686 0.79 +1.0 43,153 - GFF686 0.89 +0.2 43,153 - GFF686 0.89 +1.3 43,153 - GFF686 0.89 -0.1 43,363 + GFF687 0.15 -0.2 43,363 + GFF687 0.15 +0.5 43,609 + GFF687 0.41 -1.2 43,610 - GFF687 0.41 +0.5 43,644 + GFF687 0.45 +0.1 43,645 - GFF687 0.45 +0.3 43,645 - GFF687 0.45 -0.2 43,654 + GFF687 0.46 -0.3 43,738 + GFF687 0.54 +0.0 43,763 - GFF687 0.57 +0.1 43,783 + GFF687 0.59 -0.3 43,810 + GFF687 0.62 -0.1 43,813 + GFF687 0.62 -0.7 43,814 - GFF687 0.62 -0.6 43,839 + GFF687 0.65 -0.0 43,900 - GFF687 0.71 +0.2 43,996 + GFF687 0.81 -0.1 44,022 - GFF687 0.84 -0.3 44,171 - -0.5 44,171 - -0.5
Or see this region's nucleotide sequence