Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4885

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
1,002	-		GFF4883	0.87	+0.0
1,002	-		GFF4883	0.87	+0.1
1,195	-				-0.2
1,203	+				+0.6
1,258	-				+0.3
1,508	-		GFF4884	0.61	+0.1
1,511	+		GFF4884	0.62	+0.3
1,511	+		GFF4884	0.62	+0.2
1,527	+		GFF4884	0.66	+0.6
1,528	-		GFF4884	0.66	+0.2
1,573	+		GFF4884	0.77	+0.8
1,617	-		GFF4884	0.88	-0.1
1,854	+				-0.4
1,901	-				-0.0
1,962	+				+0.4
1,963	-				-0.7
1,968	+				-0.7
1,969	-				+0.4
2,077	+		GFF4885	0.11	+0.3
2,088	+		GFF4885	0.13	+0.7
2,096	+		GFF4885	0.14	+0.1
2,228	+		GFF4885	0.33	+0.4
2,228	+		GFF4885	0.33	+0.6
2,263	-		GFF4885	0.39	+1.3
2,268	-		GFF4885	0.39	+0.4
2,269	+		GFF4885	0.40	-0.4
2,269	+		GFF4885	0.40	+2.2
2,270	-		GFF4885	0.40	-0.2
2,420	-		GFF4885	0.62	+0.4
2,420	-		GFF4885	0.62	-1.0
2,570	+		GFF4885	0.84	+0.8
2,766	+				+0.2
2,825	-		GFF4886	0.15	-0.3
2,980	-		GFF4886	0.33	+0.9
2,980	-		GFF4886	0.33	+0.4
3,006	+		GFF4886	0.36	-0.3
3,339	+		GFF4886	0.74	+0.2
3,342	-		GFF4886	0.75	-0.2
3,537	-				+0.3
3,602	-				+0.5